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STACK service specifications


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Service Description

The Co-located Stacking (STACK) service computes the co-location of single-band assets having different map projections and spatial resolutions on a common grid. It performs resampling and warping of the secondary datasets and the stacking of each secondary with the reference. The upsampling or/and downsampling of spatially overlapping datasets is performed on a common area (intersection based on STAC asset geometry) and is based only on pixel coordinates. The service requires input geocoded products, which are a prerequisite for the stacking service. As an example, input single-band assets can be taken from multi-sensor Optical or SAR Calibrated Datasets, Results of other on-demand processing services, and Auxiliary Datasets. For more details find the section about inputs here. Co-location results depend on the level of accuracy of geopositioning of source images. The Co-located Stacking processor is built with the GDAL VRT method1. It can also generate new assets from the co-located stack using band arithmetic.

Workflow

The service implements the workflow depicted below.

graph TB c(cos2) --> dn[Dataset n] c --> d3[Dataset ...] c --> d2[Dataset 2] c --> d1[Dataset 1] dn --> b((SAR or opt<br>calibration)) d3 --> b((SAR or opt<br>calibration)) d2 --> b((SAR or opt<br>calibration)) d1 --> b((SAR or opt<br>calibration)) b --> an[input 1] b --> a3[input 2] b --> a2[input ...] b --> a1[input n] subgraph Inputs an[Dataset n] a3[Dataset ...] a2[Dataset 2] a1[Dataset 1] ba1[List of assets from<br>input Dataset 1,2,...,n] ba2[S-expression/s] end subgraph Co-located Stacking ba1 --> stack an --> stack((Co-located<br>stacking)) a3 --> stack((Co-located<br>stacking)) a2 --> stack((Co-located<br>stacking)) a1 --> stack((Co-located<br>stacking)) stack --> csn[Co-located<br>asset 1] stack --> cs3[Co-located<br>asset 2] stack --> cs2[Co-located<br>asset ...] stack --> cs1[Co-located<br>asset n] csn --> stack1((Band<br>arithmetic)) cs3 --> stack1((Band<br>arithmetic)) cs2 --> stack1((Band<br>arithmetic)) cs1 --> stack1((Band<br>arithmetic)) ba1 --> stack1((Band<br>arithmetic)) ba2 --> stack1((Band<br>arithmetic)) end subgraph Outputs csn[Co-located<br>asset n] --> o2[Co-located<br>asset n] cs3[Co-located<br>asset ...] --> o3[Co-located<br>asset ...] cs2[Co-located<br>asset 2] --> o4[Co-located<br>asset 2] cs1[Co-located<br>asset 1] --> on[Co-located<br>asset 1] stack1 --> o1[New asset/s from <br> Co-located stack] end

Inputs

Input of the Co-located Stacking service are geocoded images from supported SAR or optical sensors (e.g. geophysical single-band assets in Datasets derived systematically in the calibration processing from supported SAR and Optical sensors).

Co-location stacking is also possible if the input set of images is built by mixing assets from SAR and Optical Calibrated Datasets. Also, input assets in STACK can originates from Results of some on-demand processing services and from Auxiliary Datasets.

STACK supports single-band assets derived from the following services: PAN-Sharp, OPT-Index, BAS, IRIS, HOTSPOT, HASARD, and the two InSAR processors DInSAR and COIN (for coherence asset only).

It also supports as input the following auxiliary datasets products: JRC Global Surface Water, Copernicus DEM, ESA World Cover.

Parameters

The STACK service requires a specified number of mandatory and optional parameters. All service parameters are listed in the below Table 1.

Parameter Description Required Default value
Input product reference(s) List of Datasets, Aux Dataset or Results from other processors including assets to be co-located YES
List(s) of comma-separated bands List of assets to be colocated as comma-separeted items YES
Area of Interest Area of interest expressed in WKT NO
S-expression/s S-expression/s to generate additional asset/s from the ones in the stack (e.g. average) NO

Table 1 - Service parameters for the STACK processor.

More information about the service parameters are given below.

Input-product-reference/s

This first mandatory parameter is the list of input products that are used to create the collocated stack.

The input products can be:

  • Optical calibrated products,
  • SAR calibrated products,
  • Auxiliary datasets,
  • Geophysical results of downstream processing service executions (e.g. SAR-COIN).

Warning

The specified input-product reference must include at least one single-band asset. In the co-location only single-band assets can be used (e.g. reflectance, backscatter, binary change mask or coherence) and not overview ones.

List-of-comma-separated-bands

This second mandatory parameter is a list of bands expressed as a comma separated list of common band names. It defines, for each input-reference product, the list of common band names to extract. There's a one-to-one mapping between the input-reference and the assets parameters. The list of single-band geophysical assets to be used for the co-location shall be given as a list of comma separated items following the following convention:

reference_dataset_number.single_band_asset

Example

To build a STACK using multiple geophysical single-band assets (e.g. coastal, blue, green, red, and nir) from a single Calibrated Dataset (e.g. by specifying only one input product references 1) the users shall define the 5 input assets in STACK as following:

1.coastal,1.blue,1.green,1.red,1.nir

Example

To build a multitemporal STACK using multiple geophysical single-band assets (e.g. s0_db_c_vv, and s0_db_c_vh) from multiple Calibrated Datasets (e.g. by specifying three different Optical Calibrated Datasets given as input product references 1, 2, and 3) the users shall define the 6 input assets in STACK as following:

1.s0_db_c_vv,1.s0_db_c_vh,2.s0_db_c_vv,2.s0_db_c_vh,3.s0_db_c_vv,3.s0_db_c_vh

Example

To build a co-located stack using a pair of two coherence geophysical single-band assets (e.g. coh_c_vv_20220330_20220411,, and coh_c_vv_20220517_20220529) derived from two SAR-COIN Result, obtained by exploiting 4 Sentinel-1 SLC Datasets acquired on 20220330, 20220411, 20220517, and 20220529 (by specifying two references to COIN Results given as input product references 1, and 2) the users shall specify two references to COIN Results given as input product references 1, and 2 and define the 2 input assets in STACK as following:

1.coh_c_vv_20220330_20220411, 2.coh_c_vv_20220517_20220529

Example

It is also possible to build a co-located stack by mixing different types of single-band assets derived from Results of other processing services. As an example to co-locate the flood-mask asset from HASARD, and the coh_c_vv_20220517_20220529 one from SAR-COIN, the user must first specify references to HASARD and SAR-COIN Results as input product references 1, and 2 respectively. Later, the 2 input single-band assets can be defined in STACK as following:

1.flood-mask,2.coh_c_vv_20220517_20220529

Example

Co-located stacking also supports single-band assets from Auxiliary Datasets. As an example to co-locate the flood-mask asset from HASARD, and the worldcover one from ESA World Cover Auxiliary Dataset, the user must first specify references to an HASARD Result and the ESA World Cover Auxiliary Dataset as input product references 1, and 2 respectively. Later, the 2 input single-band assets can be defined in STACK as following:

1.flood-mask,2.worldcover

Warning

Use comma separated reference.bands and avoid inserting a space when specyfing the list of assets. Do not insert a space before/after the comma, e.g. asset1,asset2 and not asset1, asset2.

Tip

Always check the list of CBNs available in a Calibrated Dataset (or the name of assets included into an Auxiliary Dataset or a Result of a processing service) before defining list of single-band assets. A Worldview-2 MS Calibrated Dataset does not have a nir asset but a nir08 one. The ESA World Cover Auxiliary Dataset has only one single-band asset named worldcover. Result from similar on-demand change detection processing services may have multiple single-band assets with different names.

Note

All CBNs available in the ESA Charter Mapper can be found here.

AOI (optional)

This third parameter (optional) may define the area of interest expressed as a Well-Known Text value.

Warning

If set, it overrides the automatic determination of the maximum common area between the input-reference products geometry.

Tip

In the definition of “Area of interest as Well Known Text” it is possible to apply as AOI the drawn polygon defined with the area filter. To do so, click on the Magic tool wizard :fontawesome-solid-magic: button in the left side of the "Area of interest expressed as Well-known text" box and select the option AOI from the list. The platform will automatically fill the parameter value with the rectangular bounding box taken from the current search area in WKT format.

S-expression (optional)

This forth optional parameter allows generating a new single-band asset derived from the collocated image stack (e.g. average, normalized difference etc.).

A new band is defined with the name of the new output asset and it's associated s-expression separated by a colon : .

output_asset_name:(s-expression)

Warning

S-expressions can be made by using only the assets inserted in the list and not with all the ones in the source Dataset.

Warning

The s-expressions inserted by the user must be given within brackets.

As an example to derive a new asset as the average between red bands from a pair of input-reference products (1.red and 2.red):

average:(/ (+ 1.red 2.red) 2)

This will add a new asset called average in the co-located stack with average values derived from 1.red and 2.red.

S-expressions in the ESA Charter Mapper supports arithmetic (* + / -) and logical (< <= == != >= > & |) operators plus some pre-defined functions.

More information about supported functions can be found in Table 2.

Function Description Syntax
asarray convert the input (list, tuples, etc.) to an array (asarray x)
interp returns the one-dimensional piecewise linear interpolant to a function with given discrete data points (xp, fp), evaluated at x (interp x xp fp)
mean returns the mean value (scalar) from the given input array x (mean x)
norm_diff returns the normalized difference between A and B as per ((x - y) / (x + y)) (norm_diff x y)
where return elements chosen from x or y depending on condition (where (condition) x y)

Table 2 - Supported functions that can be used in s-expressions.

Note

The current list of functions can be further expanded in the future based on the user needs.

Examples of s-expressions which can be used to generate new bands from the STACK are listed in the below sections.

Sum

The following s-expression:

sum:(+ 1.pan 2.pan)

can be used to generate a band as the sum of 1.pan and 2.pan.

Difference

The following s-expression:

difference:(- 1.pan 2.pan)

can be used to generate a band as the difference of 1.pan and 2.pan.

Average

The following s-expression:

average:(/ (+ 1.pan 2.pan) 2)

can be used to generate a band as the average between the values of 1.pan and 2.pan.

Difference from average

The following s-expression:

diff_from_avg:(- 1.pan (mean 1.pan))

can be used to estimate a band of difference from the average value of 1.pan.

Normalized difference

The following s-expression:

ndvi:(norm_diff 1.nir 1.red)

can be used to derive multiple spectral indexes defined as normalized difference (e.g. NDVI, NDWI, NDBI, etc.).

Interpolate or rescale

The following s-expression:

rescaled:(interp 1.red (asarray 0 10000) (asarray 0 1))

can be used to interpolate the rescaled TOA reflectance into its original [0,1] range. Here (asarray 0 10000) returns [0, 10000] and is used to specify input range to be used for the interpolation.

Binarization

The following s-expression:

opt_water_mask:(where (>= (norm_diff 1.green 1.nir) 0.3) 1 0)

can be used to derive a water mask from the binarization of a spectral index. Here (norm_diff 1.green 1.nir) is used to derive the NDWI index. The value 0.3 represents the threshold as TOA reflectance. Similar s-expressions can be made also for SAR such as:

sar_water_mask:(where (<= 1.s0_db_c_hh -23) 1 0)

in which 1.s0_db_c_hh is the asset and the value -23 represents the threshold as Sigma Nought in dB.

Combine Datasets, Results and Auxiliary Datasets

STACK can be used also to post-process an asset from a Result of another processor. For instance, this makes possible to co-locate a flood binary map from a Result of the HASARD on-demand service with the Land Cover Auxiliary Dataset to extract flooded pixels over only a certain LC class. As an example the following s-expression:

flooded_cropfields:(where (== 2.worldcover 40) 1.flood-mask 0)

can be used to derive a flood mask over only crop fields. In this case the s-expression (where (== 2.worldcover 40) 1.flood-mask 0)) is used to generate the flooded_cropfields asset from the flood-mask one using the condition (== 2.worldcover 40). The value 40 represents the pixel value of the LC class cropfield for the single-band asset worldcover offered in the ESA World Cover Auxiliary Dataset.

Outputs

The output of this service is a multi-mission and multitemporal co-located stack with N assets as single band GeoTIFF in COG format. The output is a STAC item with as many assets as provided in input. All assets of this co-located stack are COG and have the same shape.

STACK Product specifications can be found in the table below.

Attribute Value / description
Long Name Co-located stack from Optical or SAR EO data
Short Name source_reference_number.source_asset (e.g. 1.nir)
Description Multiband co-located stack of N images from optical and radar sensors
Processing level L1 / L2 (according to input)
Data Type Float32
Band N single-band
Format COG
Projection According to input
Fill Value According to input

  1. GDAL documentation, gdalbuildvrt, available at: https://gdal.org/programs/gdalbuildvrt.html